Retrieve protein structure data from Protein Data Bank (PDB) database
filename = btd_getpdb(x) filename = btd_getpdb(x, filepath)
Unique identifier for a sequence record
local Path + filename where the file returned by the online
query must be stored. The directory must be writable.
If only a path to directory in provided, the default filename used is
built as filepath+"/pdb_"+x+".txt"
.
Name of the file returned by the query. By default (if no
filepath
is provided), it is named
"downloadFile.do" and is stored in the current directory
(that must be writeable).
Retrieves protein structure data from the online Protein Data Bank (PDB) database. A live Internet connection is required.
fn = btd_getpdb('5CYT', TMPDIR) // Open the local file in your text editor: if getos()=="Windows", winopen(fn); else, edit(fn); end fileparts(fn, "fname") | ![]() | ![]() |
--> fn = btd_getpdb('5CYT', TMPDIR) fn = C:\Users\Me\AppData\Local\Temp\SCI_TMP_7176_10748\pdb_5CYT.txt --> if getos()=="Windows", winopen(fn); else, edit(fn); end --> fileparts(fn, "fname") ans = pdb_5CYT
Version | Description |
1.1 | Input option filepath added. |