Gets sequence information from the online GenBank database
filename = btd_getgenbank(x) filename = btd_getgenbank(x, filepath)
Unique identifier for a sequence record
local Path + filename where the file returned by the online
query must be stored. The directory must be writable.
If only a path to directory in provided, the default filename
used is built as filepath+"/genbank_"+x+".txt"
.
Name of the file returned by the query. By default (if no
filepath
is provided), it is named
"efetch.fcgi" and is stored in the current directory
(that must be writeable).
fn = btd_getgenbank('M10051', TMPDIR) // Open the local file in your text editor: if getos()=="Windows", winopen(fn); else, edit(fn); end fileparts(fn, "fname") | ![]() | ![]() |
--> fn = btd_getgenbank('M10051', TMPDIR) fn = C:\Users\Me\AppData\Local\Temp\SCI_TMP_7176_10748\genbank_M10051.txt --> if getos()=="Windows", winopen(fn); else, edit(fn); end --> fileparts(fn, "fname") ans = genbank_M10051
Version | Description |
1.1 | Input option filepath added. |